
Publication: Open PHACTS computational protocols for in silico target validation of cellular phenotypic screens: knowing the knowns
Phenotypic screening is in a renaissance phase and is expected by many academic and industry leaders to accelerate the discovery of new drugs for new biology. Given that phenotypic screening is per definition target agnostic, the emphasis of in silico and in vitro follow-up work is on the exploration of…
Publications referencing Open PHACTS
Read on for a list of articles that refer to Open PHACTS and our work:
Presentation: Exploring available compound data with the Open PHACTS Discovery Platform and KNIME
252nd ACS National Meeting & Exposition, Philadelphia, USA Daniela Digles (University of Vienna) View presentation
Presentation: Mining compounds, targets and indications from the patent corpus with SureChEMBL and Open PHACTS
Seventh Joint Sheffield Conference on Cheminformatics, Sheffield, UK George Papadatos (European Bioinformatics Institute) View presentation
Publication: Using the Semantic Web for Rapid Integration of WikiPathways with Other Biological Online Data Resources
The diversity of online resources storing biological data in different formats provides a challenge for bioinformaticians to integrate and analyse their biological data. The semantic web provides a standard to facilitate knowledge integration using statements built as triples describing a relation between two objects. WikiPathways, an online collaborative pathway resource,…
Presentation: Chemical databases – challenges and solutions
20th Annual Green Chemistry & Engineering Conference, Portland, USA Valery Tkachenko (Royal Society of Chemistry) View presentation
Presentation: Adaptive Linked Data-driven Web Components: Building Flexible and Reusable Semantic Web Interfaces
13th ESWC 2016, Crete, Greece Ali Khalili (VU University Amsterdam) View presentation
Presentation: Open PHACTS – experience of sustainability
EMBL-EBI Industry Programme Workshop: Molecular Informatics Open Source Software (MIOSS) workshop, Cambridgeshire, UK Nick Lynch (Open PHACTS Foundation) View presentation
Presentation: Open PHACTS: Semantic interoperability for drug discovery
251st ACS National Meeting & Exposition, San Diego, USA Herman van Vlijmen (Janssen) View presentation
Presentation: Implementing chemistry platform for Open PHACTS: Lessons learned
251st ACS National Meeting & Exposition, San Diego, USA Valery Tkachenko (Royal Society of Chemistry) View presentation
Presentation: Representation of drug discovery knowledge in the ChEMBL and SureChEMBL databases
251st ACS National Meeting & Exposition, San Diego, USA Anna Gaulton (EMBL-EBI) View presentation
Presentation: Leveraging Open Chemogenomics Data and Tools with KNIME
KNIME Spring Summit 2016, Berlin, Germany George Papadatos (EMBL-EBI) View presentation
Presentation: Creating workflows for drug-discovery with Open PHACTS and KNIME
KNIME Spring Summit 2016, Berlin, Germany Daniela Digles (University of Vienna) View presentation
Presentation: The power of open data – Linking transporter interaction profiles to in vivo toxicity
Freie Universität Berlin Pharmaceutical Research Colloquium, Winter Semester 2015/2016, Berlin, Germany Gerhard Ecker (University of Vienna) View presentation
Presentation: Linked open data in drug discovery: Where are we?
Advances and Progress in Drug Design, London, UK Herman van Vlijmen (Janssen) View presentation
Presentation: Validata: An online tool for testing RDF data conformance
SWAT4LS International Conference 2015, Cambridge, UK Alasdair Gray (Heriot-Watt University) View presentation
Poster: Where do you go from here? Semantics of directions in biological pathways
SWAT4LS International Conference 2015, Cambridge, UK View poster
Poster: Semantic-Web Access to Patent Annotations
SWAT4LS International Conference 2015, Cambridge, UK View poster
Presentation: DisGeNET: A discovery platform for translational research: Usage Tutorial
SWAT4LS International Conference 2015, Cambridge, UK Núria Queralt Rosinach (IMIM) View presentation
Presentation: Finding novel associations across domains using linked data
SWAT4LS International Conference 2015, Cambridge, UK Marco Roos (Leiden University Medical Centre) View presentation
Presentation: RDFization of DisGeNET
BioSB Research School: Managing and Integrating Life Science Information (4th edition): Approaches using Linked Data and Semantics, Utrecht, Netherlands Núria Queralt (Universitat Pompeu Fabra) View presentation
Presentation: DisGeNET – A discovery platform for translational Research – RDF & SPARQL – Usage and Modeling Challenges
SIB Training Course: Using the Semantic Web for faster (Bio-)Research, Geneva, 30 November – 3 December 2015 Núria Queralt (IMIM) View presentation
Poster: DisGeNET: Applying Semantic Web and Network Analysis Approaches for the Integration and Analysis of Gene-Disease Associationsfor Translational Research and Drug Discovery
BioMedBridges Symposium: Open Bridges for Life Science Data, Hinxton, UK View poster
Presentation: Drug discovery FAQs: Workflows for answering multidomain drug discovery questions
4th KNIME Cheminformatics Workshop, Cambridgeshire, UK Daniela Digles (University of Vienna) View presentation
Presentation: ChEMBL resources and KNIME
4th KNIME Cheminformatics Workshop, Cambridgeshire, UK George Papadatos (EMBL-EBI) View presentation