Conference: 252nd ACS National Meeting & Exposition

On August 21, 2016, Posted by , In Conferences, By ,,,, , With No Comments

252nd ACS National Meeting & Exposition, Philadelphia, USA Daniela Digles (University of Vienna) gave a presentation: Exploring available compound data with the Open PHACTS Discovery Platform and KNIME

Presentation: Exploring available compound data with the Open PHACTS Discovery Platform and KNIME

On August 21, 2016, Posted by , In Presentations, By ,,,, , With No Comments

252nd ACS National Meeting & Exposition, Philadelphia, USA Daniela Digles (University of Vienna) View presentation

Conference: KNIME Spring Summit 2016

KNIME Spring Summit 2016, Berlin, Germany Daniela Digles (University of Vienna) presented Creating workflows for drug-discovery with Open PHACTS and KNIME, and George Papadatos (EMBL-EBI) presented Leveraging Open Chemogenomics Data and Tools with KNIME

Presentation: Creating workflows for drug-discovery with Open PHACTS and KNIME

KNIME Spring Summit 2016, Berlin, Germany Daniela Digles (University of Vienna) View presentation

Linking Life Science Data: Design to Implementation, and Beyond

Open PHACTS project closing conference (Vienna, Austria)

Publication: Selectivity profiling of BCRP versus P-gp inhibition: from automated collection of polypharmacology data to multi-label learning

The human ATP binding cassette transporters Breast Cancer Resistance Protein (BCRP) and Multidrug Resistance Protein 1 (P-gp) are co-expressed in many tissues and barriers, especially at the blood–brain barrier and at the hepatocyte canalicular membrane. Understanding their interplay in affecting the pharmacokinetics of drugs is of prime interest. In silico…

Linking Life Science Data: Final speakers and agenda

There are just three weeks to go until our conference, Linking Life Science Data: From Design to Implementation, and Beyond. If you haven’t yet registered, attendance is free and there are still places available: Register now The conference will include a variety of expert speakers and open discussions on linking…

Poster: Semantic-Web Access to Patent Annotations

SWAT4LS International Conference 2015, Cambridge, UK View poster

Conference: 4th KNIME Cheminformatics Workshop

4th KNIME Cheminformatics Workshop, Cambridgeshire, UK Daniela Digles (University of Vienna) gave a presentation: Drug discovery FAQs: Workflows for answering multidomain drug discovery questions George Papadatos (EBML-EBI) gave a presentation: ChEMBL resources and KNIME

Presentation: Drug discovery FAQs: Workflows for answering multidomain drug discovery questions

On October 5, 2015, Posted by , In Presentations, By ,, , With No Comments

4th KNIME Cheminformatics Workshop, Cambridgeshire, UK Daniela Digles (University of Vienna) View presentation

Conference: 24th Scientific Congress of OePhG

24th Scientific Congress of the Austrian Pharmaceutical Society (OePhG), Vienna, Austria Daniela Digles (University of Vienna) gave a presentation: An Open PHACTS KNIME workflow to collect compound data from public databases

Presentation: An Open PHACTS KNIME workflow to collect compound data from public databases

24th Scientific Congress of the Austrian Pharmaceutical Society (OePhG), Vienna, Austria Daniela Digles (University of Vienna) View presentation

Poster: Assessing multi target SAR by using pharmacological and pathway data from the public domain

Gordon Research Conference on Computer Aided Drug Design, West Dover, USA View poster

Conference: Österreichische Apothekerkammer 47th Scientific training event

Österreichische Apothekerkammer 47th Scientific training event for pharmacists, Schladming, Austria Daniela Digles (University of Vienna) presented a poster: Answering drug-discovery research questions with Open PHACTS and KNIME

Publication: The Application of the Open Pharmacological Concepts Triple Store (Open PHACTS) to Support Drug Discovery Research

Integration of open access, curated, high-quality information from multiple disciplines in the Life and Biomedical Sciences provides a holistic understanding of the domain. Additionally, the effective linking of diverse data sources can unearth hidden relationships and guide potential research strategies. However, given the lack of consistency between descriptors and identifiers…

Publication: Scientific Lenses to Support Multiple Views over Linked Chemistry Data

When are two entries about a small molecule in different datasets the same? If they have the same drug name, chemical structure, or some other criteria? The choice depends upon the application to which the data will be put. However, existing Linked Data approaches provide a single global view over…

6th Open PHACTS Community Workshop

Open PHACTS for Academia: Using the Open PHACTS Discovery Platform in undergraduate and postgraduate teaching (London, UK)

Publication: Transporter taxonomy – a comparison of different transport protein classification schemes

Currently, there are more than 800 well characterized human membrane transport proteins (including channels and transporters) and there are estimates that about 10% (approx. 2000) of all human genes are related to transport. Membrane transport proteins are of interest as potential drug targets, for drug delivery, and as a cause…

Poster: Answering drug-discovery research questions with Open PHACTS and KNIME

On February 28, 2014, Posted by , In Posters, By ,, , With No Comments

47th Scientific training event for pharmacists,Schladming, Austria View poster

Managing Knowledge about Tissues IMI Workshop

Managing Knowledge about Tissues (Brussels, Belgium)

Presentation: Knowledge management for transmembrane transporters

Managing Knowledge about Tissues, Brussels, Belgium Daniela Digles (University of Vienna) View presentation