Conference: Sheffield Conference on Cheminformatics 2016
Seventh Joint Sheffield Conference on Cheminformatics, Sheffield, UK George Papadatos (European Bioinformatics Institute) gave a presentation: Mining compounds, targets and indications from the patent corpus with SureChEMBL and Open PHACTS
Presentation: Mining compounds, targets and indications from the patent corpus with SureChEMBL and Open PHACTS
Seventh Joint Sheffield Conference on Cheminformatics, Sheffield, UK George Papadatos (European Bioinformatics Institute) View presentation
Presentation: Open PHACTS – experience of sustainability
EMBL-EBI Industry Programme Workshop: Molecular Informatics Open Source Software (MIOSS) workshop, Cambridgeshire, UK Nick Lynch (Open PHACTS Foundation) View presentation
Conference: MIOSS 2016
EMBL-EBI Industry Programme Workshop: Molecular Informatics Open Source Software (MIOSS) workshop, Cambridgeshire, UK Nick Lynch (Open PHACTS Foundation) gave a presentation: Open PHACTS – experience of sustainability
Webinar: SureChEMBL Patent Annotations in Open PHACTS
George Papadatos (EMBL-EBI) gives an overview of the SureChEMBL data integration with the Open PHACTS Discovery Platform, focussing on practical details of use cases and business questions that can be answered with the combination of the Open PHACTS API and workflow tools. Watch webinar video | View webinar slides
Presentation: Leveraging Open Chemogenomics Data and Tools with KNIME
KNIME Spring Summit 2016, Berlin, Germany George Papadatos (EMBL-EBI) View presentation
Conference: KNIME Spring Summit 2016
KNIME Spring Summit 2016, Berlin, Germany Daniela Digles (University of Vienna) presented Creating workflows for drug-discovery with Open PHACTS and KNIME, and George Papadatos (EMBL-EBI) presented Leveraging Open Chemogenomics Data and Tools with KNIME
Conference: SWAT4LS 2015
SWAT4LS International Conference 2015, Cambridge, UK Anna Gaulton (European Bioinformatics Institute) presented a poster: Semantic-Web Access to Patent Annotations Alasdair Gray (Heriot-Watt University) gave a presentation: Validata: An online tool for testing RDF data conformance Ryan Miller (Maastricht University) presented a poster: Where do you go from here? Semantics of directions in biological pathways…
Conference: 4th KNIME Cheminformatics Workshop
4th KNIME Cheminformatics Workshop, Cambridgeshire, UK Daniela Digles (University of Vienna) gave a presentation: Drug discovery FAQs: Workflows for answering multidomain drug discovery questions George Papadatos (EBML-EBI) gave a presentation: ChEMBL resources and KNIME
Presentation: ChEMBL resources and KNIME
4th KNIME Cheminformatics Workshop, Cambridgeshire, UK George Papadatos (EMBL-EBI) View presentation
Biological annotations in SureChEMBL
Biological patent annotations are now displayed on the SureChEMBL interface. In collaboration with Open PHACTS and SciBite, the EBI have implemented a mechanism to allow users to highlight biological entities (such as genes and diseases) within SureChEMBL patent documents. For more information see the SureChEMBL blog. This is a first step towards full integration…
Presentation: Capturing Provenance for a Linkset of Convenience
ISWC 2014, The 13th International Semantic Web Conference, Trentino, Italy Simon Jupp (European Bioinformatics Institute) View presentation
Project Meeting: SureChEMBL
SureChEMBL planning meeting at EBI (Cambridgeshire, UK)
Presentation: SureChEMBL – Open Patent Data
10th ICCS, International Conference on Chemical Structures, Noordwijkerhout, the Netherlands Anna Gaulton (European Bioinformatics Institute) View presentation
Open PHACTS endorses Data Citation
The Joint Declaration of Data Citation Principles is the culmination of work by the Data Citation Synthesis Group of Force11, made up of a range of organisations including Creative Commons, the EBI and CERN. Open PHACTS endorses this set of principles which encourages data to be cited as an important part…
New source of open chemistry patent data available
A major new source of open patent chemistry is now available, thanks to the collaboration between Digital Science and the EBI ChEMBL group. We are discussing how this data might be integrated with Open PHACTS and look forward to developing use cases in 2014.
Conference: EMBL-EBI Industry Programme Workshop
EMBL-EBI Industry Programme Workshop: Computational Tools for Chemical Biology, Phenotypic Screening and Target De-convolution, Cambridgeshire, UK Bryn Williams-Jones (Connected Discovery) represented Open PHACTS
Presentation: Real-World Open PHACTS Use Cases
EBI Industry Workshop: Data integration and its application Lee Harland (Connected Discovery) View presentation
Conference: EMBL-EBI Industry Programme Workshop
EMBL-EBI Industry Programme Workshop: Data integration and its application, Cambridgeshire, UK Lee Harland (Connected Discovery) gave a presentation: Real-World Open PHACTS Use Cases
Presentation: Open PHACTS: An Introduction
diXa Training Course: Chemical and Biological resources for Toxicology and Toxicogenomics, Cambridgeshire, UK Anna Gaulton (European Bioinformatics Institute) View presentation
Conference: diXa Training Course
diXa Training Course: Chemical and Biological resources for Toxicology and Toxicogenomics, Cambridgeshire, UK Anna Gaulton (European Bioinformatics Institute) gave a presentation: Open PHACTS: An Introduction
Conference: Biocuration 2013
Biocuration 2013 – The Conference of the International Society for Biocuration, Cambridge, UK Nick Juty (EMBL-EBI) presented a poster: Collaborative curation for identifiers.org
ChEMBL RDF Workshop held
The ChEMBL database is one of the most important sources of open drug discovery data and is a key part of linked data in the biomedical domain. Last week members of the Open PHACTS team, which includes the ChEMBL group, met at the EBI in Cambridge for a 2 day…
Project Meeting: Workshop
ChEMBL RDF Workshop (Cambridgeshire, UK)
Press Release: Five new partners join Open PHACTS
(PDF) The Open PHACTS consortium is pleased to announce that ConnectedDiscovery, the European Bioinformatics Institute, Janssen, the Netherlands Bioinformatics Centre, and the Swiss Institute of Bioinformatics have joined the project as new consortium members. The addition of these partners – bringing together respected drug discovery and bioinformatics expertise from academic institutions,…