Presentation: Validata: An online tool for testing RDF data conformance

On December 7, 2015, Posted by , In Presentations, By ,,, , With Comments Off on Presentation: Validata: An online tool for testing RDF data conformance

SWAT4LS International Conference 2015, Cambridge, UK Alasdair Gray (Heriot-Watt University) View presentation

Poster: Where do you go from here? Semantics of directions in biological pathways

On December 7, 2015, Posted by , In Posters, By ,,,,,,,,,,, , With Comments Off on Poster: Where do you go from here? Semantics of directions in biological pathways

SWAT4LS International Conference 2015, Cambridge, UK View poster

Presentation: DisGeNET: A discovery platform for translational research: Usage Tutorial

On December 7, 2015, Posted by , In Presentations, By ,,,,, , With Comments Off on Presentation: DisGeNET: A discovery platform for translational research: Usage Tutorial

SWAT4LS International Conference 2015, Cambridge, UK Núria Queralt Rosinach (IMIM) View presentation

Conference: SWAT4LS 2015

SWAT4LS International Conference 2015, Cambridge, UK Anna Gaulton (European Bioinformatics Institute) presented a poster: Semantic-Web Access to Patent Annotations Alasdair Gray (Heriot-Watt University) gave a presentation: Validata: An online tool for testing RDF data conformance Ryan Miller (Maastricht University) presented a poster: Where do you go from here? Semantics of directions in biological pathways…

Presentation: Finding novel associations across domains using linked data

On December 7, 2015, Posted by , In Presentations, By ,,, , With Comments Off on Presentation: Finding novel associations across domains using linked data

SWAT4LS International Conference 2015, Cambridge, UK Marco Roos (Leiden University Medical Centre) View presentation

Open PHACTS Newsletter 4

On January 20, 2014, Posted by , In Newsletters, By ,,,,,,, , With Comments Off on Open PHACTS Newsletter 4

Contents: The Open PHACTS Foundation has joined the project Open PHACTS API Usage Students create novel applications to use the Open PHACTS API Supporting Other Initiatives GARField and Target Dossier launched Collector released Open PHACTS user support portal 5th Community Workshop: Shaping the future of Open PHACTS New Version of…

Conference: SWAT4LS 2013

On December 12, 2013, Posted by , In Conferences, By ,,,,,,, , With Comments Off on Conference: SWAT4LS 2013

International SWAT4LS Workshop 2013, Edinburgh, Scotland Núria Queralt (Universitat Pompeu Fabra) presented a poster: DisGeNET RDF: A gene-disease association Linked Open Data resource Alasdair Gray (Heriot-Watt University) gave a presentation: Computing Identity Co-reference Across Drug Discovery Datasets Ian Dunlop (University of Manchester) presented a publication: Open PHACTS Explorer: Bringing the web to the semantic…

Award-winning Open PHACTS publications

Open PHACTS publications won the top two best paper awards at SWAT4LS 2013: Computing Identity Co-Reference Across Drug Discovery Datasets (Christian Y.A. Brenninkmeijer, Ian Dunlop, Carole Goble, Alasdair J.G. Gray, Steve Pettifer and Robert Stevens) Nanopublications for exposing experimental data in the life-sciences: a Huntingtion’s Disease case study (Eleni Mina, Mark…

Poster: DisGeNET RDF: A gene-disease association Linked Open Data resource

On December 12, 2013, Posted by , In Posters, By ,,,,,,,, , With Comments Off on Poster: DisGeNET RDF: A gene-disease association Linked Open Data resource

International SWAT4LS Workshop, Semantic web applications and tools for life sciences, Edinburgh, Scotland View poster

Presentation: Computing Identity Co-reference Across Drug Discovery Datasets

On December 12, 2013, Posted by , In Presentations, By ,,,, , With Comments Off on Presentation: Computing Identity Co-reference Across Drug Discovery Datasets

International SWAT4LS Workshop 2013, Edinburgh, Scotland Alasdair Gray (Heriot-Watt University) View presentation

Publication: Computing Identity Co-Reference Across Drug Discovery Datasets

On December 10, 2013, Posted by , In Publications, By ,,,,,,,, , With Comments Off on Publication: Computing Identity Co-Reference Across Drug Discovery Datasets

This paper presents the rules used within the Open PHACTS (http://www.openphacts.org) Identity Management Service to compute co-reference chains across multiple datasets. The web of (linked) data has encouraged a proliferation of identifiers for the concepts captured in datasets; with each dataset using their own identifier. A key data integration challenge…

Publication: Nanopublications for exposing experimental data in the life-sciences: a Huntingtion’s Disease case study

On December 10, 2013, Posted by , In Publications, By ,,,,,,,,, , With Comments Off on Publication: Nanopublications for exposing experimental data in the life-sciences: a Huntingtion’s Disease case study

Data from high throughput experiments often produce far more results than can ever appear in the main text or tables of a single research article. In these cases, the majority of new associations is often archived either as supplemental information in an arbitrary format or in publisher-independent databases that can…

Publication: Open PHACTS Explorer: Bringing the web to the semantic web

On December 10, 2013, Posted by , In Publications, By ,,,,,,,,, , With Comments Off on Publication: Open PHACTS Explorer: Bringing the web to the semantic web

The Open PHACTS Explorer is a web application that supports drug discovery via the Open PHACTS API without requiring knowledge of SPARQL or the RDF data being searched. It provides a UI layer on top of the Open PHACTS linked data cache and also provides a javascript library to facilitate…

Conference: SWAT4LS 2012

On November 28, 2012, Posted by , In Conferences, By ,, , With Comments Off on Conference: SWAT4LS 2012

SWAT4LS International Workshop 2012, Paris, France Maastricht University gave a tutorial: Biologial Pathways and the Semantic Web