Conference: Big Data in Pharma 2015
Big Data in Pharma USA 2015, Boston, USA Tom Plasterer (AstraZeneca) gave a presentation: Too Much Data or Too Little Cooperation?
Presentation: Too Much Data or Too Little Cooperation?
Big Data in Pharma USA 2015, Boston, USA Tom Plasterer (AstraZeneca) View presentation
Presentation: Data Integration in a Big Data Context
Ambient Assisted Living (AAL) Forum 2015, Ghent, Belgium Alasdair Gray (Heriot-Watt University) View presentation
Conference: Ambient Assisted Living Forum
Ambient Assisted Living (AAL) Forum 2015, Ghent, Belgium Alasdair Gray (Heriot-Watt University) gave a keynote prsentation at the “Crusade for Big Data in the AAL Domain” workshop: Data Integration in a Big Data Context
Press Release: Open PHACTS wins Linked Open Data Award in inaugural European Linked Data Contest
(PDF) Vienna, Austria – The Open PHACTS consortium is proud to have been awarded first prize in the Linked Open Data Award category of the European Linked Data Contest (ELDC). The ELDC has been established to recognise Europe’s crème de la crème of linked data and semantic web achievements. Prizes are awarded…
Open PHACTS wins the European Linked Data Contest
Open PHACTS has been awarded first place in the Linked Open Data Award of the inaugural European Linked Data Contest (ELDC).
Conference: 24th Scientific Congress of OePhG
24th Scientific Congress of the Austrian Pharmaceutical Society (OePhG), Vienna, Austria Daniela Digles (University of Vienna) gave a presentation: An Open PHACTS KNIME workflow to collect compound data from public databases
Presentation: An Open PHACTS KNIME workflow to collect compound data from public databases
24th Scientific Congress of the Austrian Pharmaceutical Society (OePhG), Vienna, Austria Daniela Digles (University of Vienna) View presentation
Presentation: Open, reusable graph annotations
BioHackathon 2015 Symbosium, Nagasaki, Japan Mark Thompson (Leiden University Medical Centre) View presentation
Conference: BioHackathon 2015
BioHackathon 2015 Symposium, Nagasaki, Japan Núria Queralt-Rosinach (IMIM) gave a presentation: The DisGeNET Discovery Platform Mark Thompson (Leiden University Medical Centre) gave a presentation: Open, reusable graph annotations
Presentation: The DisGeNET Discovery Platform
BioHackathon 2015 Symposium, Nagasaki, Japan Núria Queralt-Rosinach (IMIM) View presentation
Poster: Discriminating P-gp from BCRP inhibitory activity by multi-class classification models
8th SFB35 Symposium 2015, Vienna, Austria View poster
DNAdigest interviews Open PHACTS
Open PHACTS Foundation CTO Nick Lynch recently spoke to DNAdigest about the benefits that Open PHACTS can offer researchers, as well as about the issues of limited data sharing and ethical data sharing in life sciences. You can read the full interview at DNAdigest’s website.
DisGeNET v3.0 RDF now available
DisGeNET has just announced their latest RDF release, including: More GDAs comprising 17 000 genes and more than 14 000 diseases as linked data in the Semantic Web New disease-phenotype annotation data from the Human Phenotype Ontology New linksets A new full metadata description of the dataset compliant with the…
Presentation: SureChEMBL: An open patent chemistry resource
250th ACS National Meeting & Exposition, Boston, USA George Papadatos (EMBL-EBI) View presentation
Presentation: Topliss batchwise scheme reviewed in the era of Open Data
250th ACS National Meeting & Exposition, Boston, USA Gerhard Ecker (University of Vienna) View presentation
Presentation: Workflow-based data integration for drug discovery
250th ACS National Meeting & Exposition, Boston, USA Richard Kidd (Royal Society of Chemistry) View presentation
Conference: 250th ACS National Meeting & Exposition
250th ACS National Meeting & Exposition, Boston, USA Richard Kidd (Royal Society of Chemistry) gave a presentation: Workflow-based data integration for drug discovery Gerhard Ecker (University of Vienna) gave a presentation: Topliss batchwise scheme reviewed in the era of Open Data George Papadatos (EMBL-EBI) gave a presentation: SureChEMBL: An open patent chemistry…
Node.js library OPS.js now available
OPS.js is a JavaScript library you can use to fetch and parse responses from the Open PHACTS API. It is now available via the Node Package Manager which means that anyone using Node-based JavaScript applications can easily include it. It is also available as a single file download for standard…
Biological annotations in SureChEMBL
Biological patent annotations are now displayed on the SureChEMBL interface. In collaboration with Open PHACTS and SciBite, the EBI have implemented a mechanism to allow users to highlight biological entities (such as genes and diseases) within SureChEMBL patent documents. For more information see the SureChEMBL blog. This is a first step towards full integration…
ChemBioNavigator Webinar
ChemBioNavigator is a web application that was specifically designed to visualise the small-molecule and pharmacological data integrated by Open PHACTS. Last week BioSolveIT hosted a webinar showing how ChemBioNavigator can be used to: discover new target-compound interactions identify multi-target as well as target-specific compound sets retrieve small-molecule data from a variety…
Project Meeting: Tech Team
Tech Team Meeting (Amsterdam, the Netherlands)
Publication: Medicinal chemistry in the era of big data
In the era of big data medicinal chemists are exposed to an enormous amount of bioactivity data. Numerous public data sources allow for querying across medium to large data sets mostly compiled from literature. However, the data available are still quite incomplete and of mixed quality. This mini review will…
Conference: Bioinformatics Open Source Conference 2015
Bioinformatics Open Source Conference (BOSC) 2015, Dublin, Ireland Ian Dunlop (University of Manchester) gave a lightning presentation: Visualising Open PHACTS linked data with widgets
Presentation: Visualising Open PHACTS linked data with widgets
Bioinformatics Open Source Conference (BOSC) 2015, Dublin, Ireland Ian Dunlop (University of Manchester) Watch presentation video | View presentation slides
Pipeline Pilot Component Collection 1.5 Released
We are pleased to announce the release of version 1.5 of the Open PHACTS component collection. There are no major changes to the components, but this version is needed to connect to version 1.5 of the Open PHACTS API, which has refreshed data and several other improvements. Version 1.5 of the Open PHACTS…
Open PHACTS API Milestone
The Open PHACTS Discovery Platform passed an exciting milestone this month of having served over 250,000,000 hits since it passed into production in 2013. Our API is averaging over 25 million hits a month, and is now at version 1.5. If you would like information about moving to API version 1.5, please get…